Exceptions¶

Bases: Exception

Base exception for all BioRemPP exceptions.

Bases: BioRemPPException

Data validation error.

Bases: BioRemPPException

Error during a merge operation.

Bases: BioRemPPException

Database not found.

Bases: ValidationError

Invalid data format.

Bases: ValidationError

Empty dataset or no valid data.

Bases: ValidationError

File size exceeds maximum allowed.

Bases: ValidationError

Number of samples exceeds maximum allowed.

Bases: ValidationError

Number of KO entries exceeds maximum allowed.

Bases: ValidationError

Sample name contains invalid characters.

Bases: ValidationError

File encoding is invalid or unsupported.

Bases: BioRemPPException

Input sanitization failed.

Bases: BioRemPPException

Error during data processing.

Bases: ProcessingError

Processing operation timed out.

Bases: ProcessingError

DataFrame is empty or has no valid data.

Bases: ProcessingError

Circuit breaker is open, operation not allowed.

Bases: ProcessingError

All retry attempts exhausted.

Bases: ProcessingError

Error during a specific processing stage.

Initialize stage processing error.

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def __init__(self, stage_name: str, original_error: Exception):
    """Initialize stage processing error."""
    self.stage_name = stage_name
    self.original_error = original_error
    super().__init__(f"Error in stage '{stage_name}': {str(original_error)}")